;ID ATCOPIA37_I DNA ; ATH ; 5156 BP ;XX ;DE Internal region of the ATCOPIA37 LTR retrotransposon. ;XX ;AC AC006248 ;XX ;DT 16-DEC-1999 (Rel. 4.0, Created) ;DT 16-DEC-1999 (Rel. 4.0, Last updated, Version 2) ;XX ;KW LTR retrotransposon; COPIA superfamily; copia-like polyprotein; ;KW reverse transcriptase; RNaseH; ATCOPIA37_LTR; ATCOPIA37_I. ;XX ;OS Arabidopsis thaliana ;XX ;OC Arabidopsis thaliana ;OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; ;OC euphyllophytes; Spermatophyta; Magnoliophyta; eudicotyledons; ;OC Rosidae; Capparales; Brassicaceae; Arabidopsis. ;XX ;RN [1] (bases 1 to 5156) ;RA Kapitonov,V.V. and Jurka,J. ;RL Direct submission (December 1999) ;XX ;RN [2] ;RA Kapitonov,V.V. and Jurka,J. ;RT Molecular paleontology of transposable elements from ;RT Arabidopsis thaliana. ;RL Genetica 107 (1-3), 27-37 (1999) ;XX ;CC ATCOPIA37_I is an internal portion of ATCOPIA37, a recently active ;CC copia-like LTR retrotransposon; it is flanked by 5-bp duplications ;CC of a target site. Its long terminal repeats, deposited in Repbase ;CC Update as ATCOPIA37_LTR, are 95% identical to each other. ;XX ;DR Positions 86332 91487 Accession No AC006248 GenBank (rel. 112.0) ;XX ;SQ Sequence 5156 BP; 1738 A; 770 C; 1301 G; 1347 T; 0 other; ATCOPIA37_I agtggtatcagagctccaggcttgtatagggttgttaaggagtttcagctaaggagtttcagatcagggg ttacaagaagttttaaaagatgagtagtaacgctcgggttgaggttgacagatttgatggaaccggtgac ttctctttgtggaaggtcagaatgttggctcattatggtgttttagggctaaaaggtatcttgaacgatg agcagctgctaagagatccacctgttatagaagaggaagctgcagtagctggaagagactatcacgtcgg agattttgagctgccttccaatgttgatcttataaagtttgaaaagtcagagaaggcaaaagatcttata gtactaaacgtgggaaatcaagtactaagaaagatcaaaaactgtgagacagctgcagccatgtggtcca cattaaagaggttatacatggagacttctctacctaatcgaatctacttacagcttaagttctatactta taagatgactgattctagaagtatagatgggaatgtggatgatttccttaagctagttactgatctaaac aacataggagtagatgtgacagaggaggttcaagctatactattgttgagttcattatatgaccggtatg atcagctcaaagagacgttaaagtatggcagagacactttgagcttgaatgaagtcattggagctgcaaa atcaaaggaaagagaactcacagaaagtggaaagctctcaaagtgaaggtctgtatgtggaacaagaggc agatcagagaagaggtttgaaaaaggaaaaggcaaaccatggagaggacgttctaagagcaaaggcagat caaaatcaaggccaaagtacaataaaaacaacaagggttgtttcatctgtggtaaagaaggacattggaa gagggagtgtcctgaaaagtcttcacaagccttcaagttcagcaaacattgcaacggagccaaaacagcc actagtattaacagctagccctcaagacactaaggaagaatgggttatggattctggatgtagttttcac attacactagacaaggattctctgtttgacctacaagaatttgatggaggcaaagttttgatgggtaata tgactcacagtgaagtgaaagggattggtaagattaagatcttaaatccagatgattatgtggtcatatt aacaaatgtgcggtacatacctacaattggagaagagcggctgcaagtatgaaggaaaagactttatagt cactttctacaaagatggacagaaagtcatttctggaaaatatcaagatgggctgtactatctagaagga aaagtagtaaaaggagaagttgcagtggcaagaccagacattgacatgactagcttatggcattctaggc tgggtcatatgagcttgaagaacatgaatgtgctggttgaagaaggttacttgtcaggaaaagaagtaga caagctggaattttgtgagagttgcgtacttggaaaatctcacaaacaaagtttcccaactgctaagcac actactaaaggtatattagattatatacattctgatctctcgggatctccttctactccagaaagtcttg gtggttgtaggtactttgtgagcttcattgatgatttctcaaagaaagtatgggtgtattttctgaagac caaggatgaggcatatcacaagttcagagaatggaaacaagcagttgagaatcaaacgggcaagaagatt aagtatttaaggactgataatggtcttgaattctataatacacagtttgacaacttgtgtaaggaagatg gaattaaaaggcacagaacgtgcacttatacaccgcagcaaaacggtgtatcggagaggatgaacaagac cattatggatatagttagaagtatgcttgctgagacaggaatgagtcaagagttttgggctgaggctact tctacggcagtctacttaatcaacagaacaccgaactcgtttattggtttcaagctacctgaggaagtgt ggacaggtacaaaaccagatttaagtcatctcaggaggtttggatgttcagcctatgtccatgtcactca agacaagacaagtccaagagcagtcaaaggagttttcatgggatatccttgtggtattaaaggatataga gtctggttaccgaaagaagggaaatgcactacaagtagaaatgtggtgttcaatgaaactgagttgtaca aggacacattaagtagtgcagatgaaaggaaagaggaagctgaaaaagagtacaagaaattgaagaaagc tagaaaaagagtgtccttcagccatgatcttctcagaggtccttcaactagctgctgtgatttggatgac tcatcttctcaaggtggagaaacctcctcatcttcatcagaaagttcagaaaacttagaggaatcagaaa tgaatgaggaagttgttggatctgaaaatgagcagtctctggatgattacttattggcgagggacatgaa acgaagaagtaatatcaggcctccttccagatttgaagacgaagatttcgtagcttatgcattggcaaca gcagaagacttggaagaagaagagcctaagtcttatgaagaagcattgaaaagtagtaagagaaagcagt gggaaaatgcaatgaaagaggagatggattctcataaaaagagtcacacttgggatttaattgagaaacc agaaaagcagaagctgattggatgcaagtggatttttaaattaaagccaggcataccaggagttgagaaa cagagatacaaggctagacttgttgctaaaggtttctcgcagcaagaaggtattgattataatgaagtgt tttctttagtggtgaagcatgtctccatcaggttaatgttgtcacttatggttaacatggattatgagct ggagcaaatggacgttaaaacagcttttctgcatggtaatctagaggaaaggatcctaatgagtcagcct gaaggattcatacaagagggaaacgaaaataaagtttgtttgttgaggaaatccctatatggcctaaaac agtctcctagactttggaatcagaggtttgatgcattcatgaaggatcagaagtttgaaagaagctgtta tgacccatgtgtctacatgagagacactcaaacagacaaagctatctacttgttgctctatgttgatgat atgttgatagcttcagggaatatggctatcatacaagagcttaaaaacaagctgaattgtgagtttgaga tgaaagatttgggaaggcttcaagaattctgggtatggatatcataagagacagagaaaagggagaatta attctgtctcaaggaaactacttggagaaagtgttaaaacgtttggaatgcttgaagcaagaccagtgat tacaccaactgctgctcacttcaaattcagaagtttgtcagaagaagaaaagaaaacagaagctgttcac atggaaagaattccatatgcaaatgttgtggggagtttaatgtacgccatggttggttcaaggccagatt tagcatttgtagtgggttttatcagcagatttatgtcaagtccaggaagggagcattggtcagcagtaaa atgggtgttaaggtatttaaaaggtgcatacactcaaaacttgatttttaagaaggattctaagttctgc attgaaggattttcagattcagattatgcaacagacttggacaggagaagatcagtgacaggatatgtgt ttaaagttggtggaaacacaatttcgtggaagtcaagtttacagtctgttgtggctctttcaaccacaga agcagagtatatggctcttactgaagcagtgaaagaggccatttggttgaaaggtttgtgttcagaattg ggttttaaacaagataatgttatggttcattgtgattcgcagagtgctctagccctagcaaagaattcag ttcatcacgaaagaaccgagcacatagacactaaattcacacaacagtcaatccgacagatttcttaact aagacggtacctggtcaaaagttccagctttgctacgagcttctcaacatccactgagatggagcagcgg ctacaagtaactccaacagtctcgcaaaacaggaagaaacaagatgagtcagttttgtgagaaatactca agtgtcataattgagtaaggcattaaattggagttggtgttacctgttaagtgctggaactgcgtaggag ttgcaagttccaggtggagtatctgactacacagtttcagaaagaaattgggttaggaaatctcataatg ttgtgagattgaaaaattgctacaagagatggtgattaacggcaggtaattacgtgaaagctgttgttat tgtgctgagaggaatatcagtttcaggtggagtcctctaagaagccagctgaaatcgttgggtgtggtga ttcaactattaacaaagcagatcgagtcagatcacttggttaaaatttgaatcgcaaaatcagttggtga ggaagagcttacctaaggtcgaaattgattgggtattatctcatcgaagaagttgtggagttcgccagag aagttgtgccaatcacccgaattacattaaaaaaaaaaaaatcaagttttttcagattctctggaaatat taaaggatcctagtctctaagtgtgacaagaaagagattagagagtacctttgatgaacctggagttaca aaggaggctgtggtcagaatctaaaattgattccaatttttatcatcttctcttcatcacgggaaagaga ggaagcttggaagagattggtgaagatgagaatgggagattatgaggagatcacagccggagctaatcgc tggagaagacggccatgatgtgtcatggaaggaaggtgaagatgagagacaacgagatgtctcagattcg ccaaagtttgataccaacgggaacagaggtgtcagccggtgatggagaacgtcgccggtgtaaaacgccg gaggtaatggcaatccggtggtgtcgttgttggcttcacgaagggacaaagggaaaaggtggtttcagat aacgatttcgtcgaggaagattgtgttttgtcaaaaggtggagaat1