;ID ATCOPIA30_I DNA ; ATH ; 3869 BP ;XX ;DE Internal region of the ATCOPIA30 LTR retrotransposon. ;XX ;AC AC005970 ;XX ;DT 16-DEC-1999 (Rel. 4.0, Created) ;DT 16-DEC-1999 (Rel. 4.0, Last updated, Version 2) ;XX ;KW LTR retrotransposon; COPIA superfamily; copia-like polyprotein; ;KW ATCOPIA30_LTR; ATCOPIA30_I. ;XX ;OS Arabidopsis thaliana ;XX ;OC Arabidopsis thaliana ;OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; ;OC euphyllophytes; Spermatophyta; Magnoliophyta; eudicotyledons; ;OC Rosidae; Capparales; Brassicaceae; Arabidopsis. ;XX ;RN [1] (bases 1 to 3869) ;RA Kapitonov,V.V. and Jurka,J. ;RL Direct submission (December 1999) ;XX ;RN [2] ;RA Kapitonov,V.V. and Jurka,J. ;RT Molecular paleontology of transposable elements from ;RT Arabidopsis thaliana. ;RL Genetica 107 (1-3), 27-37 (1999) ;XX ;CC ATCOPIA30_I is an internal portion of ATCOPIA30, a copia-like ;CC LTR retrotransposon recently integrated in the genome; it is ;CC 5' truncated and flanked by the only copy of its long terminal ;CC repeat which is deposited in Repbase Update as ATCOPIA30_LTR. ;XX ;DR Positions 24308 20440 Accession No AC005970 GenBank (rel. 112.0) ;XX ;SQ Sequence 3869 BP; 1387 A; 560 C; 656 G; 1266 T; 0 other; ATCOPIA30_I agttatcagctaaaaggtagatattctcatttttttttatagaactatgtttatttatcgactcatggtt catagtatttatttttctattattgaaacaaacaatatgagccgatcgataattatgatatagattggta aaagcatgttttcaatgattcagtaaagaagataatcatgcttaccatttatttatctaattattatagc atgattcaatgattctataaagaaaatcgtcaaaaaaaaagaatcatgtttgttgattgttaatttatgt gaaatctattataataatataaaatatattatttaatttgatattttatctagttaatattgcaactatt aaatgcccggtggtgaatgatgcaagcatgcattagagcatcattattggtaggtttttaagaaattctt agcattaactttgacaaaaattaaatgaataattggtttaaattctaagaaccagctcttatataagagc caaagaactagttcttagcattaattcctagtatttttctatcttcttcgttttggatagttgcatattc aatatagttcagttaatattttattatctaaaattcttttacgattgattcaatattatttagttaatac tttatttttgataattcatatttcacaaccatgatcgtcgtacatatattattacttttgatattgactt ttcatatgtagatagatatctaatattctgatttccatatatttaatacttgattgttgattttcatata tttaatatttgattgtcctattacttttttttaacaaaaagcgttagtcaacccaattctacgtttttta attttctatgaaactttccttgcaaagtaatactttattattataagataattataatatcgttcagaag gaattgtctgtagtaaaatcgtctttgtaacagttctcataatttgcaataaaaataaatctaagacgaa aaaaaagataattgtaatattttatttgttaatgtattttgaaaattaacacatatttttttatttttga aatctagtcatatttaatcaatttttttaatattttagtaaaccatgtcaaaacttatgaatctttaatt tggaactcttgatatcacaggagataactatttggcattggtactgaatgctgaaatttatctagattca aaagatctccttgataccatcaaagatgggaatcaaactcaaagtaaagaaaaattagaagctatgattt ttctgcgataccatctccatgaggatctcaagaatgagtatttcagtgtgaaagatccgcagatcatttg gaacaatctaaagcacagttatgatcatgagaagactatgatattatctaaggtccgatatgattggact catctgagactccaagactttaaatatgtaagttagtacaactcagccttattcaaaataactttaaatt ggaattatgtggagagaaaatgatggatgcagataagttggagtagacattctctactttttaatgctaa taacattgtcttgcagacacagtacggtgaaaagggattcgtgaagtattcccaacttatttcttgtcta cttgtagctgagaaaaacaatgagttacttttgaaaaaccatggactatgcccatcaggttttgctttgt tctctgaaacgaatgtgacatgctatggtcaaaaaagtggttacaaccgtggtcgtggccgtgtatacac tagaggactaggcagtggagttcattttaagaactcaaactctcataagaagtgggaaaacaatgggacc tcaaagaaggttgggagtatatgttggttatgatttcccatcaataaaagtatctcgagccatccacatg ggatttattcaaaagctcgattcgcatactgtcattgtaatgagtctgtttttccaacattagagggata aataaacagtaagaaaaagatatactttggaatgaattatcaatgtcttatcttgatcctcggactaaag agtgtgaattagaagtccaaaagttaattcatttacagagcttagcaaatcagttgccctatgcatttac tgacccaaaagtgtgatcaaatcacatataccggttgcaaatgatccaataagaataaatatctcctaag gacaaaaacacgtttaaagcgtggtaaacctattggctcaaaaataaaaatccttaaaaaagaaaaggga cagaaattggcataggtaaaatagaaaaaataattacaaatgaggaatctcccgaagagactttagacat gacacagaaagaaattcagttacctgacaattaagagatctcaactggttatgtcatgtctagaagaaaa tagaactgaaagcaaatcgacgtcgatgatattttgcttgcaacatagcagttgatgttatggatgagga tcatgaaccaacatctattgaagagtgtacacaaagaagtgatttgccagaatggaatgaagcaatagat gcagaattaaaatttcttgcaaagagagaagtgtttggaccagtagtctgtacacccgaaagtgtaaaac cagtgggacataaatgggtctttgtacgaaagaagaatgaaaacggtgaaattgtaaggcataaagtcgc acaaggattcccacaaagacccggaattgactatgaagagacatactctcttgtggtggatgcaactaca ttttggttccttattagtctagcagtaaaagaaggacttgatttatgtttgatggatgtagtcacaacct atttatacggtccactgaaaaatgacatttatatgaaaatcccagaatgatttaaaatgtcagaagcagt acaatcaaattctcgagaacaatactgcataaaattaaatcgatccctttataaattaaaacaatcatgg tgtatgtggtataatcgccttagtgacttgctaaaagaatatacaaaaaaagactatgttagtccatgca tctttataaacagatttgggaaatgatttgttataattgtagtttatgttgatgatttaaatattatggg aacttctgcagagatctccttcacagtagaatatttaaagaaagaatttgagaagagagattttggaaaa acaaaattttgtttgggactacaaattgaacacctaaataatgtaattctggtgcatcaagagacatata cagaaaatgttctcaaaagattctacatggatggagcagtccccttgagtagcccaatggttgtaaggtc acttgatgtggataaagatccattatgtcctcgggaaaacaatgaaggagttcttagtcctgaaatatca tacttaagtgcaagttcatgtccaactcgaagacattggaatggaattaaacatatacttcgttatctcc aatgtaagaaagacatgagtctgctttttcctaaccaatttagaagatttaattggttttgcagatgcag gatacttatctgatctccataaggttttgcagatgcaggatatttatctgatctccataatggtagatcg taaacagaatatgtcttcacatgtattgctatttattggcgttctatgaagaaaactgttgcagccacat cttctaatcattcagagattttagcaattcatgaaactagccgcaagatttttagcgtgtatggctaaga tccatagttaccatatacaaaaagattgtggtatctatgcaaggaaaaaagctccaacaattatgtacaa agacaatgcagcatgcatcgcacaactcaaaaacatatacatcaaaggcgatagaacaaaggacatctta ccaaaattcttcttcacac1