;ID ATCOPIA25I DNA ; ATH ; 4228 BP ;XX ;DE Internal region of ATCOPIA25 copia-like LTR-retrotransposon. ;XX ;AC AB016892 ;XX ;DT 03-MAY-1999 (Rel. 3.3, Created) ;DT 03-MAY-1999 (Rel. 3.3, Last updated, Version 1) ;XX ;KW LTR-retrotransposon; COPIA superfamily; internal region; ;KW ATCOPIA25LTR; ATCOPIA25I. ;XX ;OS thale cress ;XX ;OC Arabidopsis thaliana ;OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; ;OC euphyllophytes; Spermatophyta; Magnoliophyta; eudicotyledons; ;OC Rosidae; Capparales; Brassicaceae; Arabidopsis. ;XX ;RN [1] (bases 1 to 4228) ;RA Kapitonov,V.V. and Jurka,J. ;RL Direct submission (April 1999) ;XX ;RN [2] ;RA Kapitonov,V.V. and Jurka,J. ;RT Molecular paleontology of transposable elements from ;RT Arabidopsis thaliana. ;RL Genetica 107 (1-3), 27-37 (1999) ;XX ;CC ATCOPIA25I is an internal region of a recently active ATCOPIA25 ;CC copia-like retroelement flanked by identical ATCOPIA25LTR ;CC LTRs and 5 bp-long target-site duplication. ;XX ;DR Positions 41548 37321 Accession No AB016892 GenBank (rel. 109.0) ;XX ;SQ Sequence 4228 BP; 1176 A; 981 C; 835 G; 1236 T; 0 other; ATCOPIA25I tggtatcagagccatggaacaatccatggaactctactctcttccatctctaaacatctcaaactgtgtc actgtgaaactcaccgaacgaaactatatcttatggaaatcccaatttgaatcgtttctgtccggtcaag ggcttcttgggtttgtcaatggcgccgtctctgctccactcagcaccgttcctggaccacaaaacaatgg tgtcaccgaagctgtctcgaatccggagcatcaagcttggctgcgcttggatcaggtggttatggcgtgg ctccttggcttgttgtctgaagacatccttagtgtcgttgttgggtctgcaacatctcacgcggtatggt ctaacctagctaagcacttcaatcgcatctcatcttctcggatttttgagcttcaacgtcgtctacatgg tttatcatatgtgaccaacttgcatctgtgggaagtccagttgcagagaagataaaggtctttgctatgg ttcacggccttactcgtgaatatgaaccgcttatcacctctcttgaaagttctctggatgctttccctgg tccaccctatgaagatattgtctatagtctcaagggttttgacgaccgtctccaacgctatgcggtcaca tctgacgtctctcctcacttagccttcaacactttcagatcttctaaccgtggtcgtggccagtcctctg gaaggggaggaagaaacagaggccgtggtagtggaaacttctccacaagaggacgcggttttcatcaaca gttctctggttcatcttctggagatcccaacactgagaaacccatgtgtcaaatttgtggtaaaagaggt catcctgctctgcaatgttggcaccgtttcgatgacagttaccaagaggagtccgatgttgcagcagctg cgttcaatgctttacacattagtgaggtaacagatgatgccggctggtttccggatacaggagcaacagc tcacattaccaacaatgctcaacgtctcagtcaatctcagccctactatggaacagatactgtaatggct agtgatggtaacttcttaccaatcactcacattggctctgcaaaacttccatccacgtcaggtatgcttc ctttaaaggatgttttagtttgccctgatattgctaaatcactgttatctgtgtcaaagctcaccaaaga ctatccttgttgcttcacttttgattctgatggtgttgttgtaaaggacaaagcaacacacaaagttctg actctcggaaaaacaagtgatgggctttacacgttggagaatccaaagtttcaaatgttctactctacta ggcaaatcacaacatctgatgaggtttggcatagacgcttagggcatccgaatgatcaagttctccaaca tttatcttccaacaaggcgattaaaataaagaagagtaccaacaagctctgtgaaccatgtcggcttgga aaaagtacaagatagccatttttcccttctgcttttactgcttcaagacccctagaaagacttcattgtg atctctggggtccagctcctgtaacttctgttcagggtttcagattttatgtagtcttcattgataattt ctcaagatattgctggttttatcttgaagaagaagtctgatttctatgatattttcattaaattccagag tcttatagaaaatcagttaaaaaaccaaaattggtacattccaatgtgatggagggggagaatttacaag tcaaagatttctgtctcacttacaagagtctggaatacaacaatacatcttatgccctcacacacctcaa caaaatggtctagctgagcgaaaacataggcaaatcacagaaatgggtcttactcttctctttcaaagca agtgtcctcagagattttgggtagaagcttatttcacagctaactttctctcgaatcttctgccaaccac tgctctggatactaaagcaagtccttatgaagttctctttaacaaagctccagactacttagccttaaga cgttttggatgcgcatgttttcccacacttcgagactatgccatcaacaagttcgatcctcgatctctac ggtgtatctttcttggctatactgagaaatacaaaggctatcggtgttactatccgcctacgggtcttgt ttacatcagtaggcatgttgtatttgatgaagcctcatttccatttactgatacgtatagtaactacacc aactcctccaatacaccattacttgctgcttggctcaagagttttcctgcttcagcacctgaaactttta ctcacacctcaaccactgctcctagtatcagtcccgtggaatcagtaacggttataacagaacctcatcc tcagataataaatgcagagggggagaacatacttcacatcactgcaacagcgtctactgattcaagtcct atgagtgatgaagagtgttctgagtgtacggcaagcattgatcttgatcctattggcaacagtactactt catcatctcctaggactgaacaatcagaagcttctgctgctcaacctactcattcaccgacagttgttca acctattcatccaatggctacaagatcaaaatctggaataacgaaaccaaatcaacggtatgctcttctt acacatagagtaacatatcctatgcctaagactgttactgcagctttaaaggatccatattggactgagg ctatgaaagaggaaattggaaactgctcagaaacaaacacatggtctttagtcccatttacacctgaaat gcatgtattgggatctaaatggatttttcgagtaaagcttaatgctgatgggtctctggataaatttaaa gcaagattagtagctcaggggttcaatcaagaagaaggaatcgattaccttgagacatacagtcccgtag tcagaacagcaacagtgagagctgtacttcatttggctacaatcatgaattgggaattgaagcagatgga tgtcaaaaatgcgttcttacacggggatctcactgagactgtgtatatgaagcagcctgctggatttgtt gatacagaaaagcctgatcatgtgtgtctgctacacaaatctttatacggattaaagcagtctccaaggg catggtttgacaaattcagtacctttctccttgcatttggttttatctacaatttttctgacccttcact atttatttgcgtcagaaacaaaaatgttatcatgcttctcctatatgtggatgacatggtcattacaggt aacaactctcagcttcttaccaatcttctcagtgaactcaataagaagttccggatgaaagacatgggac agttgcattattttcttggaattcaggcacacttccatgaagatggtctcttcatgtctcaacagaagta tgcagaagacctcctgactgttgctgcaatgtcagactgttccccagttgcaacaccgcttccgcttcaa ctgaacaaagttcctcaccaaaaagagttgttcgaaaatccaacatattttagaagcctagcagggaaac tgcagtacctcacactaactagaccagatcttcagttctctgtcaattatgtgtgtcagaagatgcatga gccaaccgtttcagactttttcctgttaaagaggattcttagatacatcaaaggcaccatcacaatgggg atttctttcaataaacgaacagatacaaagttgcgggcttacagcgatagtgattggggaggttgtcata gaacgagaagatccactggaggctactgtaccttccttggcaataatctcatctcttggtcctcaagaaa acagccttctgtctccaaaagctccacagaagccgaataccgatcaatgtccaatacagcatcagagatt acttggcttgttaatcttcttcgaagtctcagtgtccctcaattagagactccagaactcttttgcgata atctctctgcagtgtacctgaccgccaatccagcttatcatgcccgcaccaagcattttggaattcatta ccactatgttcgcgagcaggttgcgtttggagaactcattgtcaatcacatcccagctcaccttcagctt gccgatatctttacaaaatccctggctgcagctccatttgagtctctgcgattcaaacttggtgtctgtt ttcccccgactccacgtttgagggggag1