;ID ATCOPIA19I DNA ; ATH ; 4226 BP ;XX ;DE Internal region of ATCOPIA19 copia-like LTR-retrotransposon. ;XX ;AC AB018121 ;XX ;DT 12-APR-1999 (Rel. 3.2, Created) ;DT 12-APR-1999 (Rel. 3.2, Last updated, Version 1) ;XX ;KW LTR-retrotransposon; COPIA superfamily; internal region; ;KW ATCOPIA19LTR; ATCOPIA19I. ;XX ;OS Arabidopsis thaliana (strain:Columbia) DNA, clone_lib:Mitsui P1 ;OS clone:MXE2 ;XX ;OC Arabidopsis thaliana ;OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; ;OC euphyllophytes; Spermatophyta; Magnoliophyta; eudicotyledons; ;OC Rosidae; Capparales; Brassicaceae; Arabidopsis. ;XX ;RN [1] (bases 1 to 4226) ;RA Kapitonov,V.V. and Jurka,J. ;RL Direct submission (March 1999) ;XX ;RN [2] ;RA Kapitonov,V.V. and Jurka,J. ;RT Molecular paleontology of transposable elements from ;RT Arabidopsis thaliana. ;RL Genetica 107 (1-3), 27-37 (1999) ;XX ;CC ATCOPIA19I is an internal region of a recently active ATCOPIA19 ;CC copia-like retroelement flanked by 3% divergent LTRs, ATCOPIA19LTR, ;CC and 5 bp-long TCCCG target-site duplication. ;CC The 5' LTR has a 1139 bp-long external insertion. ;XX ;DR Positions 68236 64011 Accession No AB018121 GenBank (rel. 109.0) ;XX ;SQ Sequence 4226 BP; 1266 A; 917 C; 834 G; 1209 T; 0 other; ATCOPIA19I tggtatcagagccatggatagatccatggaaatttattcatgtccgtcgttagacatctcaaattgcgtt accgtaaagcttacagatcgcaactatttactatggaaatctcagttcgaatcgtttctctctggccaag gccttctcgggttcgtcactagcgcaatctcggttccagcaagcaccattccggttcctcacattgaagg tcacacggatacagctgcaaatccagatttccaggcgtggcaccgttcagatcaagtcgtcaagtcatgg cttctgggttcgcttactgaagacattcttagtgtggttgtcggttccaaaacgtctcaagaggtatggc taaacctcgcaagtcattttaaccgtatttctgcatctcgtgtctttgagcttcagcgtcgtctccatgg tttgtcaaaagaaggaaaaaccatggatgagtatttgcgttgtctaaagaatatttgcgatcagcttgct tcagtaggaagtcctgttacagaaaagatgaagatttttgcaatggttcatggtctaactcgtgaatatg agccactgattacttcacttgaaaacaccttggatgttctcctggtccatcctatactgaaatcatgttt cgtctaaaaagctatgatgataggcttcaaggatacactgcagcagatgtatcaccacacctagcatttg gtacattcaacaactcctctcgaggtcgaggtaaaggatctagaggaagaggacgcggaaactactcaac tagaggtcgaggttttcagcaacagtttctttctttaagttctcagtcgtccggtgaaagaccaacatgt cagatctgtggtaaaagaggacaccctgctattcaatgttggcatcgttttgatgaaagctatcagtact ctgaagctgctgctgctgcattctctgctttgcatattactgatgttacggatgatggtgcttgggttcc tgactctgcagcaactgctcacatcaccaacaatggtcagagactgcaacaaagtcagccctattatggt aatgacacaataatggcgagtgatggtaatttcttacccataactcacattggttctgctagtctaccat caacgtcaggtaatctgccattaaaagatgtattagtttgtcctgatatagctaaatctctgttgtcagt atcaaagttaacaaaagattatccatgctcttttacgtttgatgctaatggtgttcttgtaaaggacaaa gcaacaagcaaagttttgacaatgggaagcagcactagtgatggtctctataagttggagaatccaaagt ttcagatgttctactcaaccagacaagtcaaggcatctgatgcagtgtggcatatgagattgggacatcc gaatcctcaagtcctccagcttttatctttaagtaaggcgatcaaaatcaataaaagtaccaatgcggcg tgtgaatcctgtcgacttgggaagagttcaagattgccattttcttcttctgaatttattgcttcaagac ctctagagagagttcactgtgatctctggggtccagctcctgtttcttctgttcaaggtttccagtacta tgtaatctttattgataatctatcaagatttagttggttctatccattaaagaggaaatcagatttctgc tcaatattcatcaagtttcagagttctgttgagaatcttttacaaacgaaaattggaacttttcagagtg atggaggaggagaatttattagtcaaaggtttttcaagcagttacaagattcaggcatacaacgttatat gtcatgtcctcacacacctcaacaaaatggcatggctgaaagaaaacatagacagttgacagagatggga ctcactctaatgtttcaaagcaagacaccacagaaatattgggttgaagctttctttacatcaaactttc tcagcaaccttctaccaacaatagctctagcaaccaagattagtccatatgaagctttgtttggaaaagt tccaaactactcggctttaaggactttcggttgtgcatgctttccaacacttcgagactatgctcgcaca aagtttgatccgtgatctctgaaatgtatctttctaggatacactgataaatacaaaggctatcgatgtt tctatccaccaacaggcagagtttatctgagtcgtcatgtcttgtttgctgaagaatctttcccattcgc agacacttacatcaatcagcagactgcatctccaactccattgtttgcagcttggcttcaaggtttttcc actacttcgtcatcagaaaccaatacgcaagaaaatggaacaactgcttctacagagaatcatcaacaag agtccatgtcagaaaatcaaccaatttttggaaatggtttgagtgaggagaactctgaaaatatgcaact aacgattgcagatccaataagtgctataccgttacaaacagttcttcagcaagataatgaaacaacaccg gagcaaaggtctagaagtgatggaaaacgtcctgagtgtacggctagcttagatcttgatcctataggca acatcgtttctccgttaccttctagactagagcaacttgcatcaagaacaactacagctacagaatcaac tcatcctatggtaacaagatccaaggcaggtattagcaaaccaaataaaaggtatgccatgcttgctcat aaagtctctcatccaatgcccaaaacagtaactgaagctttaaaagatgaaaagtggactgctgcaatga atgtgttaggttccaagtgggttttcagagtaaagcttctagctgatggatctttagacaagtataaagc tagattagtagctcaaggctttaatcaagaagagggaatagattaccttgagacctacagtcctgtggtt agatcagcaactgtgagagcagtcttgcatcttgccaccatcatgaattgggaactgaagcaaatggacg taaagaacgcatatcttcacggagatcttacagaaactgtgtacatgaagcaaccagctggatttgtaaa aaaggcattaccaaatcatgtgtgcctgctacacaagtctctctatggactaaaacagtccccacgagca tggtttgacaaattcagtaacttcttactctcttttggttttgtatgcagtttttcagatccatctctct ttgtctgcgtaaagaactcggatgttatcatgttgcttctcaacgttgatgatatggtcatcactgggga cagctcaaagctactgtcaaatctcctcaacgaactcaacaaacaattcaagatgaaagatctaggcaaa ctcaactattttttgggaattcaggctcaatttcatcaaaagggtctcttcttatctgaaccaaaatatg ctgaagatctccttttcacagctggcatgaaagactgtgctccagtggcaacaccattaccaattcagcc agacaatgctcctcatcagtcacaactctttgataatccaacatattttcgcagtctcgcgggaaaattg cagtatctgacactcacaaggccagacattcaattctctgtgaactatgtctgtcagaagatgcacgctc ctacgctatcagatttccacctactgaaacgcattttaagatatatcaaaggtaccactacaatgggaat ttctttcaacaaaaacacagactgtaaattgagggcttatagtgatagtgatcatgctggatgtcatgct tcacggagatccactggaggtttctgtacctttctaggtaacaatctcatatcgtggtcatcaagaaaac aaccaacggtagcaaagagctccactgaagctgaatacagggcaatgtcagagacggcttcagaaatcac ctggattgtcaatcttctcaaagatctaggagttccttagttgcagaaaccagaactattctgtgacaat ctttctgcagtttgcctcactgcaaatccatcattccatccgagaacaaaacacttcgcaactcactatc attatgtgcgtgaacaagtcgcgtttagggagctcatcgtcaatcacatcccagggtatcttcaactagc tgacatcttcacaaaatctcttccagcagctccgttcacaactctaagattcaaacttggcgtcgatttg ccaccaactccaagtttgagggggag1