;ID ATCOPIA18I DNA ; ATH ; 2144 BP ;XX ;DE Internal region of ATCOPIA18 copia-like LTR-retrotransposon. ;XX ;AC AB010070 ;XX ;DT 12-APR-1999 (Rel. 3.2, Created) ;DT 12-APR-1999 (Rel. 3.2, Last updated, Version 1) ;XX ;KW LTR-retrotransposon; COPIA superfamily; internal region; ;KW ATCOPIA18LTR; ATCOPIA18I. ;XX ;OS Arabidopsis thaliana (strain:Columbia) DNA, clone_lib:Mitsui P1 ;OS clone:MBK20 ;XX ;OC Arabidopsis thaliana ;OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; ;OC euphyllophytes; Spermatophyta; Magnoliophyta; eudicotyledons; ;OC Rosidae; Capparales; Brassicaceae; Arabidopsis. ;XX ;RN [1] (bases 1 to 2144) ;RA Kapitonov,V.V. and Jurka,J. ;RL Direct submission (March 1999) ;XX ;RN [2] ;RA Kapitonov,V.V. and Jurka,J. ;RT Molecular paleontology of transposable elements from ;RT Arabidopsis thaliana. ;RL Genetica 107 (1-3), 27-37 (1999) ;XX ;CC ATCOPIA18I is an internal region of a recently active ATCOPIA18 ;CC copia-like retroelement flanked by 2% divergent ATCOPIA18LTR ;CC LTRs and 5 bp-long ATTAG target-site duplication. ;CC The 5' half of the ORF encoding copia-like polyprotein is ;CC deleted. ;XX ;DR Positions 41862 44005 Accession No AB010070 GenBank (rel. 109.0) ;XX ;SQ Sequence 2144 BP; 610 A; 403 C; 434 G; 697 T; 0 other; ATCOPIA18I tggtatcagagcaaagaaaaattgttttctcattcactttctcgagaaagttctaacaaccaattttcca ggaaaaattcaccaaattcatcgtcttcttcatcatcttcttccattttttctgcttttgtcttcaaatc gtcatcatcaacgacgattctcacattatcatcttcatccatcatcatttcgcagctcaatttgctgtta tcttcaatcgataagcaacatcaagctttcgatctttccttcaattcatctctacatcacaatcatcgcg attcacattgaatcttcttccgctttcattcacttcatcgatctggatttggttgttacttcttgaactt actcgattctttgattctttcattgaataatggcaggctaaaacgatcatctaaagctccaagttactta tcggattaccattgttctctcatacacaccaatcctacaccaaaggtcattactactccttatcctcttt cttctttcctttcatatgctcagataaagcccacctaccaaaattttgtgctttctatttcggttgagac agaaccaaaaacatttaaagaagtcatagcatctgttcagtggactatggctatgaatgtggaactaggt gttatggaacttaataagacttggagtgtagtttctttaccaccaaataagaatgtagttgggtgtaaat gggtatatactattgagtacaatgcagatggctctatagaacgatataaagcacggttggttgctaaagg tttcacacaacaggaaggagtagactactttgatactttctcccctgtggctaagcttgctagtgtgaaa ttagttctaggattagtagctagaaaaggatggagtacgactcaaatggatgtcacaaatgcatttttgc atagtgacctagaagaagaaatttatatgagtcttgctcaaggatacacaccatcttcaggatctttacc accaaatccagtttgcagacttcataaatccatatatggattgaaacaagcttcacgacaatggtataag tgcttgtctcagactttacttgatgatggctttcaacaatcttatgtggataacacgttgtttgttaaga tcacatccactgctattgtggctatgttgatatatgtggatgatatcttgattgtgagtaataatgatga agttgtttgtgctgtgaagagtgttctggctgcaaggtataagatcaaggatttgggtccagcaaagttt tttcttggcttggagatagcaaggaactctgatggtatttcgatatgtcagagaaagtattgtttggatt tgttggctaattctggtctattaggatgcaagcctaaatcagtgcctatggatccgaaggtggttcttac gaaggatttaggtactttacttgaagatggaagaccttacagagaattgattgggaggttactgtatctt tgtgttacaagaccggacattacatttgcagtccataatctcagtcaattcttatcttgcccaacgaatg ttcatttgcatgcggcacatcaggttttgaaatacctaaagaacaatccaggtcaaggtttgttttcctc tgcaggaacagaattgtacttaaatggctttgctgatgctgattggggaacatgcttggactccagaaga tcagtaagtggtgtgtgtgtatttcttggcacttctctgattacttggaaatctaaaaagcaggaagtag ccagtggaagtagcacagaagcagagtacaggagtatggcagtagcgactaaggaattgttgtggttagc tcaaatgctgaaagacttacatgtggagatggagtttcaggttaagctcttttgcgataataaatcggct atgcatattgcaaataactcggtgttccatgagcgaactaaacatgttgaaatcgactgtcatactacac gagatagagtcaagaatggcttcttgaaggttcttcatgttgatacagagaaccaacttgctgatattct gactaaggcgcttcaaccaggtccatttcggtctatccttggtcgtctatcagtgtcaagcctcttcctt cctcaaaaaggtcaagctatacaggattcggcttgaggggggtg1