;ID AT9TSD1 DNA ; ATH ; 2216 BP ;XX ;DE AT9TSD1 is a nonautonomous DNA transposon - a consensus ;DE sequence. ;XX ;AC . ;XX ;DT 05-JAN-2001 (Rel. 6.0, Created) ;DT 05-JAN-2001 (Rel. 6.0, Last updated, Version 1) ;XX ;KW Nonautonomous DNA transposon; MuDR; AT9TSD1. ;XX ;OS consensus ;XX ;OC Arabidopsis thaliana ;OC Eukaryotae; mitochondrial eukaryotes; Viridiplantae; ;OC Charophyta/Embryophyta group; Embryophyta; Magnoliophyta; ;OC Magnoliopsida; Capparales; Brassicaceae; Arabidopsis. ;XX ;RN [1] (bases 1 to 2216) ;RA Kapitonov,V.V. and Jurka,J. ;RL Direct submission (January 2001) ;XX ;CC AT9TSD1 is a nonautonomous DNA transposon. ;CC There are at least 5 copies of AT9TSD1 in the genome; ;CC they are ~97% identical with the consensus sequence. ;CC AT9TSD1 has 12-bp terminal inverted repeats; ;CC Since AT9TSD1 copies are flanked by 9-bp target site duplications, ;CC it's very likely that MuDR-like transposase was a catalyst of ;CC AT9TSD1 transpositions in a recent past. Its 5'-GGA...TCC-3' termini ;CC hint also a relation with MuDR-like transposons. ;XX ;DR [1] (Consensus) ;XX ;SQ Sequence 2216 BP; 846 A; 326 C; 258 G; 786 T; 0 other; AT9TSD1 ggattttaatctctttggccccttttggttgaatcaatttttgaaaaaccctcacttattctcactaccc cctctccttcctaacctatttgaaatacaattttacccttctcctttattttttttaattttctatttaa tttttgctaccaaataatttattaaaatcaaccaatcatatgcattctctctcttatctcattaatcact taaacctacaaaaaacgctggacaactgaaaccaataggcacaactatgttgatggacttctacgaaaac atataattacatatcgttttttttttctctttgattttcaagttataatcaaaaagacttcagtcatacg cattgcttataatggatactattaatttttttgtcgtatttatacaaattaatatgttttgtattggtac aactaagtacaacccgcacaactaaggtctattcacttggctagttttcagaatattataaaatatgaaa atttaaaacaaaactaagaaaacttaaataatgcatacacaatggtaatgaaattacataattagttttt gacaaaaatcatattttctaaattaatgaaactcttatcacaaaatctaacattcatacactaacaacct tatactttcatggttactttgtatattttaacaaaacaaattaaaaattttaaatacttgtaattagata aatataaatacaccgatacaaagtaatggtattttgatgggggaataccatatgttccacccataaaaat tagttttgagttgataacaactagatttattatattctcgatattgtacaactatgagcaaaaatgtgca accgagtacaactgtacaactatgggcaatatatttttcagatatttatagatattttttagatatttgt agatattttataataaaaattagctttatttttttgtgataaaaatatttagttttttttttgtcatcaa aaatacttaattttatagttaaataaactatttttttccctttcaaacttttttttccttttcaaaacac tgttgtttaataaaataaaatactaacattcataattttttgtgttttgttttggatcaaaatacgttga tgtgtagattcatatttattttggagttttttttgacaaaaaatcttagattcatacataaactcagata catagttgtacatgagcgtaccagttgtacctaaacgcttagatctattatcttaaaacaaaaagacagc cgaacaattgtatctaaacccaaaaacccaacataattatatctaaaaatttagccacaattatacctaa aaccaaaaacacaacactatctaaagactcaaacaagaagccttcttcttctctttgtcattctccttct caatttctttctccacagctttctccttcttcccttttcttctagtttttatcattcaaaagcaatctca taatattttgttttaatgcatttcacaaactatctctaaggaacaaaattcaaattcattcgaatcccaa ttgtaatcctaaaaactaagtcataatggctattagaagaggcttttaagggacaatttcgattttaaat cgataattaattcaaatttgaattgtaatcataaaaatccaaattataatcgaaatttcatccaaaatcc atcattttcaaacaaaatcaaagagaaaaaagatcaaactatcaaatctaataaaaaataaaaccctaat taaacacaacaccatcaatcatcatatatagaatagagatggatttttggattgatagaaacaaatgaaa aggtaaaaaagatggatctttggattgatagaaagaatgaaaaggtaaaaaggagacgaaagattatata tggaatagagagaagagagtaaagagaagaagaagaagaaacaaatcaaaaattttgtttttgttgaatt gagagaaaaataaattgaagatgaaaaaaatttgatctgagaaattagattttttttttgttgagaagaa aagatccaaaattgttatggatctagatccaacatagaggttgggttgtaaataagtgaaaaactctagt tttacttgtcttttactattattctgaattgaaataaataaataaacatatgtttttttataagggggct aactagagaatgtttgaagctgagggggtggactagattaaaatcc1