Repbase Reports

2013, Volume 13, Issue 2
February 28, 2013
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 874

DNA-8_ALy

DNA transposon from Arabidopsis lyrata - a consensus.

Submitted:
22-Mar-2011
Accepted:
28-Feb-2013
Key Words:
DNA transposon; Transposable Element; nonautonomous; DNA-8_ALy
Source:
Arabidopsis lyrata
Organism:
Arabidopsis lyrata
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
[2] Authors:
Kojima,K.K. and Jurka,J.
Title:
DNA transposons from Arabidopsis lyrata.
Journal:
Repbase Reports 13(2), 874-874 (2013)
Abstract:
TSDs are 10-bp long. This consensus is generated from 30 sequences with >96% identity. ~550-bp TIRs. Both termini are ~79% identical to those of ATREP17.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Hu,T.T., Pattyn,P., Bakker,E.G., Cao,J., Cheng,J.F., Clark,R.M., Fahlgren,N., Fawcett,J.A., Grimwood,J. et al.
    The Arabidopsis lyrata genome sequence and the basis of rapid genome size change.
    Nat Genet 43(5), 476-481 (2011)

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