Repbase Reports
2011, Volume 11, Issue 9
September 30, 2011
Copyright © 2001-2011 - Genetic Information Research Institute, Mountain View, California
ISSN# 1534-830X
Page 2349

Copia-18_BG-I

LTR retrotransposon from barley powdery mildew: internal portion.

Submitted:
22-Mar-2011 		Accepted:
30-Sep-2011
Key Words:
Copia; LTR Retrotransposon; Transposable Element; Copia-18_BG_; Copia-18_BG-LTR; Copia-18_BG-I
Source:
Blumeria graminis 		Organism:
Blumeria graminis 		Taxonomy:
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Erysiphales; Erysiphaceae; Blumeria
[2] Authors:
Jurka,J. and Kohany,O.
Title:
LTR retrotransposons from barley powdery mildew.
Journal:
Repbase Reports 11(9), 2349-2349 (2011)
Abstract:
Positions [1689-2210] - Integrase core LTRs are 98% similar to each other. The original sequence included Gypsy-31_BG-LTR insertion in opposite orientation in its ORF. The LTR was deleted and the ORF restored. Therefore, the sequence is processed and listed as "conensus".
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Spanu,P.D., Abbott,J.C., Amselem,J., Burgis,T.A., Soanes,D.M., St??ber,K., Ver Loren van Themaat,E., Brown,J.K. et al.
    Genome expansion and gene loss in powdery mildew fungi reveal tradeoffs in extreme parasitism.
    Science 330(6010), 1543-1546 (2010)

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