Repbase Reports
2011, Volume 11, Issue 8
August 31, 2011
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 2218

Copia-3_PTc-I

LTR retrotransposon from the Phaeodactylum tricornutum genome: internal portion.

Submitted:
16-Aug-2011 		Accepted:
31-Aug-2011
Key Words:
Copia; LTR Retrotransposon; Transposable Element; Copia-3_PTc_; Copia-3_PTc-LTR; Copia-3_PTc-I
Source:
Phaeodactylum tricornutum 		Organism:
Phaeodactylum tricornutum 		Taxonomy:
Eukaryota; stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum
[2] Authors:
Jurka,J.
Title:
LTR retrotransposons from the Phaeodactylum tricornutum genome.
Journal:
Repbase Reports 11(8), 2218-2218 (2011)
Abstract:
Positions [2943-3266] - Integrase core 'ACAA' target site duplication LTRs are 98% similar to each other. We thank the Broad Institute Genome Sequencing Platform for making the data for Puccinia triticina available.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Armbrust,E.V., Berges,J.A., Bowler,C., Green,B.R., Martinez,D., Putnam,N.H., Zhou,S., Allen,A.E., Apt,K.E. et al.
    The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism.
    Science 306(5693), 79-86 (2004)

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