Repbase Reports |
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| 2010, Volume 10, Issue 8 |
| August 28, 2010 |
| Copyright © 2001-2010 - Genetic Information Research Institute, Mountain View, California |
| ISSN# 1534-830X |
| Page 1098 |
Gypsy-18A_SB-I |
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LTR retrotransposon from sorghum: internal portion. |
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Submitted: 15-Jul-2010 |
Accepted: 28-Aug-2010 |
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Key Words: Gypsy; LTR Retrotransposon; Transposable Element; PMD; Gypsy-18A_SB-I |
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Source: Sorghum bicolor |
Organism: Sorghum bicolor |
Taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACCAD clade; Panicoideae; Andropogoneae; Sorghum |
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Authors: Bao,W. and Jurka,J. |
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Title: LTR retrotransposons from sorghum. |
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Journal: Repbase Reports 10(8), 1098-1098 (2010) |
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Abstract: Compare to Gypsy-18_SB-I, Gypsy-18A_SB-I contains extra ~5100-bp portion near to the 3'-end, encoding two extra proteins on the complementary strand, whose relatives are also found in other Gypsy LTR retrotransposons found in other plants. Gypsy-18A_SB-I_3p contains plant mobile domain (PMD) domain, which is also found associated with some MuDR transposases.
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Derived: Positions 348054 365080 Accession No ABXC01001026.1 EMBL/GenBank/DDBJ |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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