Repbase Reports
2010, Volume 10, Issue 6
June 30, 2010
Copyright © 2001-2010 - Genetic Information Research Institute, Mountain View, California
ISSN# 1534-830X
Page 840

Copia-1_UM-I

LTR retrotransposon from the Ustilago maydis genome: internal portion.

Submitted:
28-Jun-2010 		Accepted:
30-Jun-2010
Key Words:
Copia; LTR Retrotransposon; Transposable Element; Copia-1_UM_; Copia-1_UM-LTR; Copia-1_UM-I
Source:
Ustilago maydis 		Organism:
Ustilago maydis 		Taxonomy:
Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago
[2] Authors:
Jurka,J. and Kohany,O.
Title:
LTR retrotransposons from the Ustilago maydis genome.
Journal:
Repbase Reports 10(6), 840-840 (2010)
Abstract:
Positions [1582-2097] - Integrase core LTRs are 99% similar to each other.
Derived:
Positions 4020 8460 Accession No AACP01000055 EMBL/GenBank/DDBJ
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Kamper,J., Kahmann,R., Bolker,M., Ma,L.J., Brefort,T., Saville,B.J., Banuett,F., Kronstad,J.W., Gold,S.E., Muller,O., Perlin,M.H., Wosten,H.A., de Vries,R., Ruiz-Herrera,J., Reynaga-Pena,C.G., Snetselaar,K., McCann,M., Perez-Martin,J., Feldbrugge,M., Basse,C.W., Steinberg,G., Ibeas,J.I., Holloman,W., Guzman,P., Farman,M., Stajich,J.E., Sentandreu,R., Gonzalez-Prieto,J.M., Kennell,J.C., Molina,L., Schirawski,J., Mendoza-Mendoza,A., Greilinger,D., Munch,K., Rossel,N., Scherer,M., Vranes,M., Ladendorf,O., Vincon,V., Fuchs,U., Sandrock,B., Meng,S., Ho,E.C., Cahill,M.J., Boyce,K.J., Klose,J., Klosterman,S.J., Deelstra,H.J., Ortiz-Castellanos,L., Li,W., Sanchez-Alonso,P., Schreier,P.H., Hauser-Hahn,I., Vaupel,M., Koopmann,E., Friedrich,G., Voss,H., Schluter,T., Margolis,J., Platt,D., Swimmer,C., Gnirke,A., Chen,F., Vysotskaia,V., Mannhaupt,G., Guldener,U., Munsterkotter,M., Haase,D., Oesterheld,M., Mewes,H.W., Mauceli,E.W., DeCaprio,D., Wade,C.M., Butler,J., Young,S., Jaffe,D.B., Calvo,S., Nusbaum,C., Galagan,J. and Birren,B.W.
    Insights from the genome of the biotrophic fungal plant pathogen Ustilago maydis.
    Nature 444(7115), 97-101 (2006)

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