Repbase Reports
2009, Volume 9, Issue 6
June 30, 2009
Copyright © 2001-2009 - Genetic Information Research Institute, Mountain View, California
ISSN# 1534-830X
Page 1165

HERO-3_BF

HERO-3_BF is a family of HERO non-LTR retrotransposons - a consensus.

Submitted:
26-May-2009 		Accepted:
30-Jun-2009
Key Words:
Hero; Non-LTR Retrotransposon; Transposable Element; HERO-3_BF
Source:
Branchiostoma floridae 		Organism:
Branchiostoma floridae 		Taxonomy:
Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma
[3] Authors:
Kapitonov,V.V. and Jurka,J.
Title:
HERO non-LTR retrotransposons from the lancelet and zebrafish genomes.
Journal:
Repbase Reports 9(6), 1165-1165 (2009)
Abstract:
This is a young family of HERO non-LTR retrotransposons. The consensus sequence was built based on multiple alignment of several copies less than 2% divergent from each other.
Derived:
[3] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Bouneau,L., Fischer,C., Ozouf-Costaz,C., Froschauer,A., Jaillon,O., Coutanceau,J.P., Korting,C., Weissenbach,J., Bernot,A. and Volff,J.N.
    An active non-LTR retrotransposon with tandem structure in the compact genome of the pufferfish Tetraodon nigroviridis.
    Genome Res 13(7), 1686-1695 (2003)

  2. Kojima,K.K. and Fujiwara,H.
    Cross-genome screening of novel sequence-specific non-LTR retrotransposons: various multicopy RNA genes and microsatellites are selected as targets.
    Mol Biol Evol 21(2), 207-217 (2004)

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