Repbase Reports |
|---|
| 2008, Volume 8, Issue 7 |
| July 31, 2008 |
| Copyright © 2001-2008 - Genetic Information Research Institute, Mountain View, California |
| ISSN# 1534-830X |
| Page 771 |
MuDR-12_VV |
|||
|---|---|---|---|
MuDR-12_VV, an autonomous DNA transposon - a consensus sequence. |
|||
|
Submitted: 11-Jul-2008 |
Accepted: 31-Jul-2008 |
||
|
Key Words: MuDR; DNA transposon; Transposable Element; mutator; TIR; Mutavine-12; MuDR-12_VV |
|||
|
Source: Vitis vinifera |
Organism: Vitis vinifera |
Taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; Vitales; Vitaceae; Vitis |
|
| [1] |
Authors: Benjak,A., Forneck,A. and Casacuberta,J.M. |
||
|
Title: Genome-wide analysis of the cut-and-paste transposons of grapevine. PlosONE: submitted. |
|||
|
Journal: Repbase Reports 8(7), 771-771 (2008) |
|||
Abstract: MuDR-12_VV (Mutavine-12 in [1]) consensus is an autonomous element. Its individual copies are >90% identical to the consensus sequence. MuDR-12_VV contains 423-447 bp-long TIRs which are 86% identical and flanked by 9 bp-long TSDs. Note that elements from this family contain an additional putative gene downstream of the TPase, encoding for an ULP1-like protein similar to CAN67356.1 (region 5103-6702).
|
|||
|
Derived: [1] (Consensus) |
|||
|
Download Sequence - Format: IG, EMBL, FASTA |
|||
|
References: |
|||