Repbase Reports |
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| 2006, Volume 6, Issue 4 |
| April 30, 2006 |
| Copyright © 2001-2016 - Genetic Information Research Institute |
| ISSN# 1534-830X |
| Page 190 |
Rehavkus-1_CS |
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This is a recently transposed copy of the Rehavkus-1_CS DNA transposon - a fossilized copy. |
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Submitted: 30-Apr-2006 |
Accepted: 30-Apr-2006 |
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Key Words: Rehavkus; DNA transposon; Interspersed Repeat; Rehavkus-1_CS |
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Source: Ciona savignyi |
Organism: Ciona savignyi |
Taxonomy: Eukaryota; Metazoa; Chordata; Urochordata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona |
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| [1] |
Authors: Kapitonov,V.V., Gentles,A.J. and Jurka,J. |
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Title: Rehavkus-1_CS, a family of Rehavkus DNA transposons from the sea squirt Ciona savignyi genome. |
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Journal: Repbase Reports 6(4), 190-190 (2006) |
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Abstract: Rehavkus-1_CS belongs to the Rehavkus superfamily of "cut and paste" DNA transposons, which are widespread in different metazoa, including insects, sea squirts, sea urchin and fish. The genome harbors two copies of this tranpsoson. Its ~5-kb inverted termini are composed of a 406-bp terminal inverted repeat and 190-bp subterminal minisatellite-like unit. The transposon is flanked by a 9-bp target site duplication and encodes an incomplete 325-aa Rehavkus-1_CS tranposase.
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Derived: Positions 21979 5332 Accession No AACT01024047 EMBL/GenBank/DDBJ |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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