Repbase Reports
2006, Volume 6, Issue 2
February 28, 2006
Copyright © 2001-2008 - Genetic Information Research Institute, Mountain View, California
ISSN# 1534-830X
Page 106

MARINERNA8_MD

MARINERNA8_MD, a non-autonomous Mariner element from opossum Monodelphis domestica.

Submitted:
17-Feb-2006 		Accepted:
28-Feb-2006
Key Words:
Mariner; DNA transposon; Interspersed Repeat; non-autonomous; MARINERNA8_MD
Source:
Monodelphis domestica 		Organism:
Monodelphis domestica 		Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
[2] Authors:
Gentles,A. and Jurka,J.
Title:
MARINERNA8_MD, a family of nonautonomous Mariner elements from M. domestica.
Journal:
Repbase Reports 6(2), 106-106 (2006)
Abstract:
There are around 1400 full or partial copies of this non-autonomous Mariner in Monodelphis domestica. The consensus sequence has nearly perfect 22 bp TIRs, and generates TA target site duplications. Average similarity to the consensus is around 90%. The consensus was was reconstructed from the June 2005 release of the 6.8X WGS sequence.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. The Broad Institute of MIT and Harvard, Cambridge, MA, USA. Monodelphis domestica sequencing consortium
    Monodelphis domestica WGS sequence.
    Initial data release, version 2

© 2001-2008 - Genetic Information Research Institute