Repbase Reports
2006, Volume 6, Issue 2
February 28, 2006
Copyright © 2001-2008 - Genetic Information Research Institute, Mountain View, California
ISSN# 1534-830X
Page 77

LTR43_MD

LTR43_MD, a family of retroviral long terminal repeats from Monodelphis domestica - consensus.

Submitted:
08-Feb-2006 		Accepted:
28-Feb-2006
Key Words:
Endogenous Retrovirus; Interspersed Repeat; MdoLTR2
Source:
Monodelphis domestica 		Organism:
Monodelphis domestica 		Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
[3] Authors:
Gentles,A. and Jurka,J.
Title:
LTR43_MD, a family of long terminal repeats from the opossum M. domestica.
Journal:
Repbase Reports 6(2), 77-77 (2006)
Abstract:
LTR43_MD is a non-autonomous LTR element, probably of an ERV. Average similarity of copies to the consensus is around 96%. The internal region corresponding to this LTR is unknown. This consensus was reconstructed from the June 2005 release of the 6.8X WGS sequence.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. The Broad Institute of MIT and Harvard, Cambridge, MA, USA. Monodelphis domestica sequencing consortium
    Monodelphis domestica WGS sequence.
    Initial data release, version 2

  2. Smit,A.F.A.
    MdoLTR2.
    Direct Submission to Repbase Update (27-OCT-2005)

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