Repbase Reports

2002, Volume 2, Issue 5
May 31, 2002
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 21

HAT1N_DR

HAT1N_DR is a nonautonomous DNA transposon - a consensus.

Submitted:
31-May-2002
Accepted:
31-May-2002
Key Words:
Nonautonomous DNA transposon; hAT superfamily; HAT1_DR; HAT1N_DR
Source:
consensus
Organism:
Danio rerio
Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Actinopterygii; Neopterygii; Teleostei; Euteleostei; Ostariophysi; Cypriniformes; Cyprinoidea; Cyprinidae; Rasborinae; Danio
[1] Authors:
Kapitonov,V.V. and Jurka,J.
Title:
HAT1N_DR, a family of nonautonomous hAT-like DNA transposons from zebrafish.
Journal:
Repbase Reports 2:(5) p. 21 (2002)
Abstract:
~1000 copies of HAT1N_DR are expected to populate the zebrafish genome. HATN1_DR copies are ~90% identical with the consensus sequence. This element is characterized by imperfect 9-bp terminal inverted repeats and the 8-bp target site duplications. The HAT1N_DR family is a nonautonomous derivate of some autonomous element similar to HAT1_DR. The HAT1_DR consensus sequence and HAT1_DR share the ~85% identical ~240-bp and ~140-bp 5' and 3' termini, respectively.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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