Repbase Reports |
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| 2002, Volume 2, Issue 2 |
| February 28, 2002 |
| Copyright © 2001-2016 - Genetic Information Research Institute |
| ISSN# 1534-830X |
| Page 3 |
ATCOPIA97I |
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Internal portion of the ATCOPIA97 copia-like LTR-retrotransposon - a fossil. |
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Submitted: 28-Feb-2002 |
Accepted: 28-Feb-2002 |
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Key Words: LTR-retrotransposon; COPIA superfamily; ATCOPIA97 family; internal portion; pol; reverse transcriptase; ATCOPIA97LTR; ATCOPIA97I |
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Source: Arabidopsis thaliana |
Organism: Arabidopsis thaliana |
Taxonomy: Eukaryota; Viridiplantae; Charophyta/Embryophyta group; Embryophyta; Tracheophyta; euphyllophytes; Spermatophyta; Magnoliophyta; eudicotyledons; Rosidae; Capparales; Brassicaceae; Arabidopsis |
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Authors: Kapitonov,V.V. and Jurka,J. |
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Title: The ATCOPIA97 family of copia-like LTR-retrotransposons. |
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Journal: Repbase Reports 2:(2) p. 3 (2002) |
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Abstract: ATCOPIA97I is an internal portion of the ATCOPIA97 copia-like LTR retrotransposon flanked by 3% divergent LTRs, ATCOPIA97LTR, and 5 bp-long TSDs (CTAAW). ATCOPIA97 is one of ~100 families of copia-like LTR-retrotransposons, which were active in the A. thaliana genome during last 20 Myrs. A few false stop-codons and a putative long deletion have damaged ORF which encoded originally an intact copia-like polyprotein.
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Derived: Positions 21264 18131 Accession No AC006436 GenBank |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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